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start [2013/02/07 18:12]
david [About JUICE-R function]
start [2015/12/15 14:00] (current)
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 +~~NOTOC~~
 ====== About JUICE-R function ====== ====== About JUICE-R function ======
  
-Authors: David Zelený & Lubomír Tichý+====Authors: David Zelený & Lubomír Tichý====
  
-This wiki is intended ​to be an open platform for sharing ​R scripts, which are tailored to be run directly from JUICE program in order to analyze, visualize or otherwise process ecological data stored in JUICE. ​[[http://​www.sci.muni.cz/​botany/​juice/​|JUICE]] is a freeware Windows OS program for editing and analysis of ecological data, while [[http://​www.r-project.org/​|R]] is a freeware multiplatform program environment for data analysis and visualization. Connection between these two programs extends JUICE'​s functionality ​in the way that data stored in JUICE could be directly ​exported into R and analyzed using appended R script.+JUICE-R ​is a way how to run R scripts ​using data directly ​exported ​from JUICE. JUICE-R ​scripts are basically R scripts written ​in the way that they can be directly ​launched from JUICE program, using species ​and header data exported from JUICE.
  
 +[[http://​www.sci.muni.cz/​botany/​juice/​|JUICE]] is a freeware Windows OS program for editing and analysis of ecological (mainly vegetation) data, while [[http://​www.r-project.org/​|R]] is a freeware multiplatform program environment for data analysis and visualization. Connection between these two programs extends JUICE'​s functionality in the way that data stored in JUICE could be directly exported into R and analyzed using appended R script.
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 +
 +This wiki is intended to be an open platform for sharing R scripts, which are tailored to be run directly from JUICE program in order to analyze, visualize or otherwise process ecological data stored in JUICE.
  
 ===== About JUICE ===== ===== About JUICE =====
 {{  :​downloads:​juice-7.0.jpg?​250|}} {{  :​downloads:​juice-7.0.jpg?​250|}}
-The program JUICE has been developed since 1998 by Lubomír Tichý from Masaryk ​Univerzity ​in Brno, Czech Republic. It was designed as Windows application for editing, classification and analysis of large phytosociological tables and other ecological data. With current maximum capacity of 1.000.000 relevés and sufficient number of species in one table, JUICE utilises many functions for easy manipulation of table and header data. Various options include classification using COCKTAIL, divisive (TWINSPAN) and aglomerative methods, calculation of interspecific associations,​ fidelity measures, average Ellenberg indicator values, preparation of synoptic tables, automatic sorting of relevé tables, and export of table data into other applications (text editors, table processors or mapping packages).+The program JUICE has been developed since 1998 by Lubomír Tichý from Masaryk ​University ​in Brno, Czech Republic. It was designed as Windows application for editing, classification and analysis of large phytosociological tables and other ecological data. With current maximum capacity of 1.000.000 relevés and sufficient number of species in one table, JUICE utilises many functions for easy manipulation of table and header data. Various options include classification using COCKTAIL, divisive (TWINSPAN) and aglomerative methods, calculation of interspecific associations,​ fidelity measures, average Ellenberg indicator values, preparation of synoptic tables, automatic sorting of relevé tables, and export of table data into other applications (text editors, table processors or mapping packages).
   *[[http://​www.sci.muni.cz/​botany/​juice|JUICE website]]   *[[http://​www.sci.muni.cz/​botany/​juice|JUICE website]]
  
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